Smart compilation disabled by automatic script execution?

If you can, please file a Software Request about Smart Recompiling not working. I really thing these Tcl scripts should be used more. (The thing I'd like to do is a pre-processing script, i.e. more intelligence in a .tcl file that makes assignments to your .qsf before each compile. This allows a lot of cool things. For example, one file with two pinouts(for two boards) and a single setting lets the user decide which pinout to use. True-scripts for assignments(like for-loops), etc.))