Thank you FvM and Anand Raj Shankar
I was able to get the pin Assignment by searching a bit more on internet.
As for the programming the FPGA I still have some problems, here is what I do:
SW1, SW3, SW4 default configuration
SW4: Also I tried Factory user = off
SW5 I tried with default configuration
SW5 I tried with MSEL1 0 and 1
To activate Active Serial MSEL 0 and MSEL 1 should be 0 , 0 according to 13. Configuring Cyclone FPGAs (Cyclone Handbook Volume 1 chapter 13)
*Quartus Prime Lite Edition Software
Load project
Assigments->Device->Device and Pin Options
Configuration scheme: Active serial 1x
Configuration device Auto
Compile
File->Converting Programming File
Programming file type: JTAG indirect configuration file *.jic
Configuration device: EPCQ128A/EPCS128
Flash loader->Add device: Cyclone V / 5CGTFD9E5
SOF Data->Add file: File.sof
Generate
*Quartus Prime Programmer Lite Edition Software
Autodetect 5CGTFD9E5
Select 5CGTFD9E5 click change file select file.jic
Check Program/Configure checkbox
Start
Operation failed
The error I got is
Error (209025): Can't recognize silicon ID for device 1. A device's silicon ID is different from its JTAG ID. Verify that all cables are securely connected, select a different device, or check the power on the target system. Make sure the device pins are connected and configured correctly.
Error (209012): Operation failed