Hi Sai2403 ,
In Quartus v25.3 there is a issue where incoming video frame arrives at one very specific point in time it can result in the clock lane leaving HS at the same instant that the data lanes enter HS. This has the potential to be the cause the issue you seeing.
To confirm that your issue is match with issue in v25.3 , I would suggest you to signaltap
- PPI between the MIPI CSI Tx and D-PHY IPs.
- If this is the cause then during data transmission the LINK1_CK_TxRequestHS and LINK1_CK_TxReadyHS signals will be logic 0,
- while the LINK1_D0_TxRequestHS and LINK1_D0_TxReadyHS are logic 1.
I would suggest you to try out the design in v25.3.1 directly.
- Re-create a design via 25.3.1
- Migrate the design to v25.3.1 , please ensure you re-generate the HDL/IP before compilation. This is to ensure that the latest ip been implement
Last but not least, checking your design, I found there is few things is left un-declare under the top level.

Regards,
Wincent_Altera