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What is the biggest advantage of FPGA ? Reconfiguration. And i need it reconfigure it many times in circuit. And if i will produce 1000 pcb-s with this device i dont want to program each one!
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You should use sof file for directly configuration of the MAX 10 logic array via JTAG (not for CFM programming, for CFM programming you must use pof file). After the power is switched off your configuration will be lost.
This will be an "analogue" of the passive serial configuration, as you want. Is not it?