Solved
I used the assignment editor in order to enable the termination but unfortunately the fitter gives warning saying:
Warning (171167): Found invalid Fitter assignments. See the Ignored Assignments panel in the Fitter Compilation Report for more information.
In the ignored assignment report I can find my on chip termination assignment!
I suppose you made a wrong assignment. You need to choose "Input termination" -> "Differential".
Hope that helps.
Best regards,
Ivan