Please pay attention that this is the FATAL error: QSYS builder cannot work at all with any project.
Any QSYS IP that is the first in the instantiation queue is failed and followed by the message about all further IPs
in the queue also to be failed.
In the simple test case project with only JTAG UART and On-Chip SRAM, QSYS fails on the first of these two in the queue
(JTAG UART, for instance).
So, no any specific component (QSYS IP) that causes this failure.
And no any specific QSYS project that causes this failure.
And no any specific Quartus/QSYS version(s) that causes this failure.
In my opinion, something wrong with Perl Run-Time Machine that is specific for only this computer environment.