Assigning a bank a voltage in Quartus defines the bank as that voltage. In this case, the bank would become a 3.0v bank. Checking the Recommended Operating Conditions in the Datasheet, VCCIO for a 3.0v bank is allowed to be a max of 3.15v, so even at the nominal 3.3v value of a 3.3v VCCIO, it would be out of spec. That means that some percentage of the devices would not function correctly.
Interestingly, VCCIO for a 3.3v bank is allowed to be a minimum of 3.135v, which overlaps with the 3.0v range. So it would be possible to tune the 3.3v supply down to 3.14v, and use it with both 3.0v and 3.3v banks.
While this is technically feasible, it would require power supplies with very tight tolerances, which are much more expensive than adding external termination.
The only clean solution that I see is to add another VRM to the board, and that is also probably the cheapest solution.
Happy Friday!!!