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I'm having the same problem too. The Qsys 'details' dialog box shows the right path, but the component editor wouldn't allow me to change the faulty path regardless how many times i try.
I solved it by deleting the tcl, and remaking the component. Not a novel workaround perhaps? but there's nothing else i can do.
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Qsys Component editor gave me a lot of trouble.
The workaround that I am using right now is fairly simple until they fix the bug.
I use SOPC builder component editor. It is easier than the one in Qsys. My file system looks like this (A qsys subsystem that needs to integrate a custom component )
/Qsys_subsystem_alphaQsys_subsystem_alpha.qsys
Custom_component_hdl/
custom_component_top.vhd
custom_component_hw.tcl
When you open the subsystem with Qsys it will display the custom component and you can add it to your design. the _hw.tcl file is made by SOPC builder. It works for components with multiple synth files
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