ALTPLL_RECONFIG megafunctions cannot be simulated with the NativeLink flow

Description

If you start simulation of a design that contains an ALTPLL_RECONFIG megafunction from the Tools menu of the Quartus II software, the simulation incorrectly reports no toggling of the reconfig and output clock signals.

Resolution

Instead of running your simulation tool from within the Quartus II software, run simulation from your simulation tool.