thanks for your help,I will try the Debug techniques later.
as the scheme of powet above, I connect the VCCIO of bank1 to the 3.3V,
I have doubt this, because the jtag pins and EPC pins are both in the bank1, but jtag is powered at 2.5V and EPC is powered at 3.3V.
I followed the Figure 10-30 on cyclone3 device handbook to design the config scheme(Programming Serial Configuration Devices In-System Using the JTAG Interface).
VCCIO of bank1: 3.3V
VCCIO of other banks: 2.5V
VCCINT:1.2V
VCCA: 2.5V
MSEL :0010 (1 to 2.5V)
(you can see the detailed connection via the scheme above, maybe it's not clear enough, you can save it to your local coputer and then enlarge it)